#!/bin/tcsh

#create a temp textfile to store the path
set tempfile = "temp.txt"
pwd >> $tempfile
#read path from tempfile
set mypath = `awk 'NR==1 {print $0}' $tempfile`
rm -rf $tempfile

set filename = $mypath/Middle.img
echo $filename > "Middle.txt"
echo "256 256 256" >> "Middle.txt"
echo "1   1   1" >> "Middle.txt"

set filename = $mypath/Old.img
echo $filename > "Old.txt"
echo "256 256 256" >> "Old.txt"
echo "1   1   1" >> "Old.txt"

set filename = $mypath/Young.img
echo $filename > "Young.txt"
echo "256 256 256" >> "Young.txt"
echo "1   1   1" >> "Young.txt"

set filename = $mypath/Middle_brain.img
echo $filename > "Middle_brain.txt"
echo "256 256 256" >> "Middle_brain.txt"
echo "1   1   1" >> "Middle_brain.txt"

set filename = $mypath/Old_brain.img
echo $filename > "Old_brain.txt"
echo "256 256 256" >> "Old_brain.txt"
echo "1   1   1" >> "Old_brain.txt"

set filename = $mypath/Young_brain.img
echo $filename > "Young_brain.txt"
echo "256 256 256" >> "Young_brain.txt"
echo "1   1   1" >> "Young_brain.txt"

echo "headers for ATLAS images have been created"
